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Published 20 hours ago • verified publisher icon aertslab

PWMs in motif collection.

Open FelixWaern opened this issue 10 months ago • 1 comments

Hello! I was wondering whether PWM is used interchangebly with PFM in the motif collections? It says "The files named metacluster_*.cb contain position weight matrices (PWMs) for multiple motifs." in the description but certain metaclusters, for example metacluster_167.5 have motifs represented as PFMs. jaspar__MA0080.6 is the exact same as in the JASPAR database. Thanks in advance!

FelixWaern avatar Apr 23 '24 11:04 FelixWaern

yes.

ghuls avatar May 02 '24 09:05 ghuls