André Soares

I don't know why it doesn't let OS X handle spell check like it does elsewhere.

Following your comment I decided to test run it via Docker on my local macOS machine. I installed Funannotate following the "Quickest start Docker" instructions. This local machine never had...

I have the same problem, and installing latex outside of Conda like suggested in the link didn't work. I ended up here: https://github.com/conda-forge/texlive-core-feedstock/issues/19 -- still haven't found a solution…

Small update. Now I can plot stuff, even with a bunch of ` WARNING findfont: Generic family 'sans-serif' not found because none of the following families were found: Helvetica font_manager.py:1418`...

> Hi @jtweir, the correct handling of sex chromosomes is in progress and will be addressed in the next update (along with general support for non-diploid data). I actually need...

I'd love that too!

Your command line is missing "-s". Something like "seqprep -f SRR2017741_1.fastq.gz -r SRR2017741_2.fastq.gz -1 SRR2017741_1_seqprep.fastq.gz -2 SRR2017741_2_seqprep.fastq.gz -s SRR2017741_merged.fastq.gz" should probably work.

It means it comes **from** a circularised sequence. So you **don't** have to add duplicate sequences at the beginning and end.

How big is the fastq file? I'm wondering if it's crashing because of memory issues.