Adrien Berchet

Feature cache

10

# Issue Sometimes we want to compute features on different sets of neurites or morphologies. While it is possible to compute all the features we need, store them and then...

Features should return consistent types

1

The `NeuroM.features.*` functions return inconsistent types. For example, `segment_taper_rates` returns a list of `floats` while `section_taper_rates` returns a list of `numpy.float32`. This can be annoying to process results (e.g. it's...

Upload releases to conda-forge?

4

Some packages that depend on NeuroM would like to create a release on conda-forge (see https://github.com/brainglobe/brainglobe-meta/issues/9). This is currently not possible because NeuroM is not released on conda-forge (all dependencies...

ENH: Add serialization options to to_csv

9

### Feature Type - [ ] Adding new functionality to pandas - [X] Changing existing functionality in pandas - [ ] Removing existing functionality in pandas ### Problem Description Sometimes...

Add more options for ASC and SWC loaders

14

Fixes #427

Should we support less restrictive SWC format?

12

Some softwares (e.g. https://alleninstitute.org/what-we-do/brain-science/research/products-tools/vaa3d/) might create SWC files with less restrictive specs (e.g. a root ID that is not equal to -1, see https://github.com/Vaa3D/vaa3d_tools/issues/38). I guess this is also true...

Set locale to ensure dots are recognized as decimal points in SWC files

5

In some cases, the function `sscanf` does not recognize dots as decimal points because of the `locale` settings of the user (french in my case, so `sscanf` expects commas as...

Add a flag to disable some checks

6

MorphIO performs many checks when loading a file, but sometimes these checks are more restrictive than the standard (e.g. soma representation is more restrictive than the standard, it does not...