Adam Tyson

Hey @noisysky, it's been a while since we looked at this. I think we're pretty close to being able to merge this. If you don't have the time, let me...

> Also, I noticed that fMOST align better without any pre-processing at all, compared to standard brainreg pre-processing, therefore it makes sense to keep the option of disabling the pre-processing....

Great, thanks. At some point I'll move the preprocessing into it's own module, then I'll check back to see what the current status of fmost preprocessing is.

May scrap this in favour of creating workflows within napari that allow use of other registration tools with BG atlases.

Closing in fsvour of https://github.com/brainglobe/brainglobe-registration

Closed as completed

Preprocessing is now optional and in future all additional preprocessing options will be handled by custom code using the brainreg python API or using napari plugins.

May scrap this general issue in favour of creating workflows within napari that allow use of other registration tools with BG atlases. However, thanks to @JulesScholler the hemisphere registration seems...

Closing in favour of https://github.com/brainglobe/brainglobe-registration

Closed as completed by @willGraham01