abrantesas

I don't think so. The files were created by talon_label_reads according to the tutorial here.

I have never worked with symbolic links so I am not sure what I am looking for. If I run ls -hs in the folder I see the labeled.sam file...

[TALONconfig.csv](https://github.com/mortazavilab/TALON/files/7914150/TALONconfig.csv) Thanks for the help. What do you mean by that? If I type "ls /nas/depts/007/sullilab/shared/longread_2020/03analysis/talon/labeled/pt_043_001/pt_043_001_labeled.sam" the console just echoes /nas/depts/007/sullilab/shared/longread_2020/03analysis/talon/labeled/pt_043_001/pt_043_001_labeled.sam