abanerjee10

Empty alignment gaf output

4

I get empty output gaf files when aligning reads to genome graphs. How do I resolve this issue? Data: [vg_toy_x.zip](https://github.com/lh3/minigraph/files/10886648/vg_toy_x.zip) Command: minigraph -t 24 -cx lr vg_toy_x.gfa vg_toy_x.fastq