Alison Appling
It seems I can only use `target_name` in a command if it's the first argument. I would like to be able to use that variable anywhere in a command. this...
``` > library(streamMetabolizer) USGS Active Research Package: https://owi.usgs.gov/R/packages.html#research This package was developed for research purposes. We used it for our own applications and welcome flexible, resilient users who can help...
Ran into an interesting issue during testing - I don't think this should be Bayes specific, but this is the code I ran and the error message I got: ```...
For an MLE model where some days have been excluded (e.g., for `NAs in DO.obs`) ```r predict_metab(mm) ``` yields a data.frame where the `errors` column is NA whenever a day...
- show both bayesian & multi-step MLE? - choosing parameters for priors - burnin time is important - make it long enough. 2000-4000 or so - look at the output,...
Based on discussion and tests of #376, I now have these tasks: - [x] rename "daytime process error" (pd) to "GPP process error" (pp) -> done - [x] disallow the...
for `y_var %in% c('conc', 'pctsat')`, `pi` models should have prediction line segments that each start at a DO.obs value and progress toward the next one. what we have now is...
GPP.daily.sd, etc. are standard errors, aren't they? not sure why i've used SD all this time, except maybe that they come from the SDs of the MCMC chains
Bob's advocating for a return to including K600 in the standard plot (which is/used to be `plot_metab_preds`). I agree with the sentiment and have also thought about adding a plot_params()...
see also #294 (for plots specifically): DO predictions for non-oi-only models require different methods from oi-only models. - [ ] `predict_DO.metab_bayes` should make use of `err_proc_iid`, `DO_mod`, etc. if these...