aCoalBall

> Hi @aCoalBall , > > Can you show some more of the code - specifically how you're handling the `pod5_reader`? > > Also, are you processing many files, or...

By the way, it seems not due to memory runs out. I tried to specify different size of memory but it just shut down at the same position (around 300000th...

> Interesting. > > @aCoalBall can you confirm it still crashes if you don't do your downstream processing? > > I wouldn't expect the code above to retain the signals...

> ok thanks. > > What is your environment like - what sort of OS, VMem, Physical Memory available etc? > > Thanks, > > * George Hi @jorj1988 Here...

@jorj1988 Yes, there is a virtual memory limit ``` [coalball@gc066 ~]$ ulimit -v 134217728 ```

> Hi @aCoalBall , > > Would you be able to test the following code to ascertain if this is virtual memory issue? > > ```python > pod5_reader = pod5.Reader(pod5_path)...

> Hi @aCoalBall, > > I've been running the below on a system similar to yours and not seen a crash yet... can you confirm this _does_ crash for you?...