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we are also getting this error

Also getting the following error: ``` ERROR: [Torch-TensorRT] - Method requested cannot be compiled by Torch-TensorRT.TorchScript. Unsupported operators listed below: - aten::lstm.input(Tensor input, Tensor[] hx, Tensor[] params, bool has_biases, int...

This use case came up for us too. In the case similar to mentioned by @blostein, In our case the sequencing partner would say: Indexed adapter sequences The full-length adapter...

Hi, Thanks for the insights here, Do you know if it would be possible to adapt this for working with RNA-seq as inputs rather than CAGE-seq? I'm curious why in...

@multimeric I have also noticed the missing `benchmark.py` and our team's current needs is indeed a vouch for your closing statement. We would otherwise have to build our own CLI...

@multimeric , I have now gotten a local repo which utilises `read_fasta_file_as_list_of_pairs`, by importing this into the` score_alignments.py` script to accept `someFile.fasta` as input rather than a hard-coded python list....

@multimeric , I have now gotten the score_alignments.py to work for purely DNA sequences so sum-of-pairs score can be calculated by providing a DNA substitution matrix as input file argument....

I noticed your tutorial on using pyMSA: https://github.com/benhid/pyMSA/blob/master/resources/tutorial-pymsa.pdf refers to a script that is actually missing from the repo (https://github.com/benhid/pyMSA/blob/master) itself, specifically a python file called: benchmark.py In the tutorial...