CMplot
CMplot copied to clipboard
YinLiLin
📊 Circular and Rectangular Manhattan Plot
Hello, I really enjoy this package. However, I noticed I had some holes in my circular plot, which I drew a circle in red around here: I zoomed in on...
Hi! Thanks for this nice package. I'm trying to make some multi-trait manhattan plots (for eQTL results), but have run into issues whilst practicing on single-trait plots. My plot without...
Hi @YinLiLin , Thanks for developing such a useful package. I really enjoy using it! I wonder if I can highlight some genes in a different color myself. I know...
Hi, In the SNP_density plot I was not clear whether the bin-size parameter indicates overlapping window size or non-overlapping window sizes. If it is overlapping windows, then by how much...
Hi, I'm plotting a subset of my chromosomes and am wondering if there's a way to get all the chromosomes labelled? I have chromosome 30 and 31 on the same...
Hi Lilin, I'm very thank you for developing this tool. I want to draw a Circular Manhattan plot between p-value and no p-value. for example, SNP CHR BP trait1 trait2...
Hi Lilin, Thanks very much for developing this useful tool. I wonder if there is a way to add highlighed text labels right on top of the points, like [this...
Hi, first of all thanks for such a nice tool you developed! :) Secondly, I'm trying to run the circular type to plot values of nucleotide diversity but for some...
Hello! I'm trying to use CMplot 4.0.0 to generate SNP density plots, and my length is as follows:  Is there any meyhod to modify length as this one: ...
Hey, @YinLiLin Awesome package with colourful plots! I am using this package to plot differential methylation. I have points that are hypermethylated (positive values) and de-methylated (negative values) as seen...
