Yifan Deng

Hello. For the code of the three tasks, I didn't upload it to the github because it may be too verbose. You can leave an email address and I'll send...

@ShenggengLin The code has been sent. Thanks for your appreciation. For the metric curve, we mainly use matplotlib, and we use R for the boxplot. For other figures, we use...

Hi! I just debug the code and found that there may be something wrong with the parser of BeautifulSoup package. I changed the way from 'lxml' to 'html.parser' just now...

The smiles in my database have been transformed with RDKit. You can search how to use RDKit to transform the SMILES into fingerprints. Here I transform SMILES into 881 dimension...

The original prediction has the shape of [batch_size, event_number], and it corresponds to the shape of y_true_one_hot. So I think [3. 2. 0. ... 2. 0. 0.] may be y_true...

Yes, after you get the prediction result 3 for a drug-drug pair. Then you have look up the mapping relationship between your labels and mechanism, action. So that you can...

Leave your IM app(telegram, what’s app etc) and account and I’ll contact you there.

Hi! Which IM app do you use? I didn't find you on telegram.

Hi, Shenggeng! For the first problem, this is because the same drug-drug pair are recorded twice in the data. For example, (sildenafil, Isosorbide mononitrate) and (Isosorbide mononitrate, sildenafil) for another....

Yes, you are right. The reason is because the fingerprint methods are different. For the fingerprint in the current dataset, it is obtained by a former student. He used the...