Yichen-HNU

Out-of-Range Error

5

Hello, Thank you for providing this software! However, I encountered the following error when using phase_contacts_with_monte_carlo: [0h 0m 0s] Loading GFA... No index found, generating .gfai for "chr1.asm.bp.r_utg.gfa" ... done...

A bug and a runtime error.

3

Thank you for providing the tool! However, I encountered the following issues during execution: In command_line.py, there is an undefined output_file, and I suspect that the author intended to provide...

Dear Haoyu Cheng, I hope this email finds you well. I am currently trying to inspect the mapping results of Hi-C data in hifiasm+Hi-C. However, my programming skills are not...

High hamming/switch error when evaluating hifiasm+Hi-C assembly using yak

2

Dear chhylp 123, I assembled HG002 using the hifiasm+Hi-C module with the following command: /home/work/yichen/hifiasm/hifiasm -o HG002.asm -t 80 $read1 $read2 $read3 $read4 $read5 $read6 --h1 $hic1 --h2 $hic2 I...