Yinying Yao

Unnecessary residue change when loop inpainting.

2

Hi! I tried to rebuild a loop of my protein of interest using the following: ``` python /repo/RFDesign/inpainting/inpaint.py --pdb ../my.pdb --contigs A1-338,2-3,A343-585 --out RF_inpaint/338-343_pilot --num_designs 10 python /repo/RFDesign/inpainting/inpaint.py --pdb ../my.pdb...

Customized Position Repacking in DiffPack

1

Hi, I really like this project. For many protein design tasks with just a few mutations, local repacking around specific positions is more computationally efficient. Can DiffPack repack customized positions...

Hi, I just got an error from my daily test, raised via a new tf version with Keras3. ## In brief Since we have pinned tensorflow as `^2.5.0`, newly installed...

PR-1: Hydra-Powered YAML Configuration and run as Pip module

2

This is one of the separated PRs from #321 . # Full PR roadmap | id | purpose | # commits | Affected | | :---: | :--- | :---...

feat/docs/cases: Covalent Bond Input

1

This is one of the separated PRs from #321 . # Full PR roadmap | id | purpose | # commits | Affected | | :---: | :--- | :---...