Y-Pei

Split view coordinates annotated incorrectly

1

Hi, I have noticed an issue where the coordinates for split view plots seem to be incorrect. For instance, in one of your examples here https://layerlab.org/2019/06/04/Samplot-improvement.html: The deletion was generated...

New module: picard/splitsambynumberofreads

3

## PR checklist Closes #8669 - [X] This comment contains a description of changes (with reason). - [X] If you've fixed a bug or added code that should be tested,...

### Is there an existing module for this? - [x] I have searched for the existing module ### Is there an open PR for this? - [x] I have searched...

Are Ns counted into DEPTH?

2

Many thanks for the extremely fast tool! In the doc it says: ``` DEPTH The total depth at the position SUM(A, C, T, G, DEL) ``` While from our test...