Xiao Zhong

Can pafr display the percentage of reference sequences aligned by query in Coverage plot?

1

Very beautiful tool to show sequence alignment. RT. Thanks!

Read sequences don't have overlapping with gene, but eachoverlap() reported there're.

5

 As shown, the gene "ENSMUSG00000080478.1" wasn't mapped by any read, though there're reads mapping to a nearby multi-exon gene "ENSMUSG00000041560.12". In fact, the first gene is located in one...

Error executing process > 'install_IEDB (Install IEDB)'

3

Hi, Sorry for bothering you again! First, thanks! I'm slowly pushing forward in running your pipeline, and have encountered the issues below: 1, as posted, the pipeline failed to install...

Hi Andrew, I just started using antigen.garnish for a VCF file I have, but it reported the error below that I cannot overcome. `> garnish_variants("test.vcf") Loading VCFs Scanning file to...