Wuxy96

Hi jebrosen, Thanks for your reply, I've got another question about the principle of RepeatMasker, I'm not clear about the step of TRF is based on the results of RMBlast(or...

I got it! what if masked sequence didn't map to libraries, that is to say, the input reads just have simple repeats without any LINE/SINE... Would .out file report the...

Hi, Recently I checked the .out file and found that one alignment may be split into several parts showed in the picture. Were these three alignments actually one LINE-1 insertion...

Thanks for your reply, I got it, the ID column is 1042689,1042690,1042689,1042691,1042689. As you metioned above, RepeatMasker would clip out  young near-full-length annotations, I wonder RepeatMasker how to tell they...