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Thank you for your reply. I have tested the txt file you provided and it is consistent with the results in the article. I would also like to evaluate my...

Thank you for taking the time to reply to me, I will try it again. The previous try didn't turn out right, as I said the first time I asked...

Hello, Dr. Kulmanov, I am back, I have tested several times. The above is tested with the txt file generated by data-cafa3/predictions.pkl, the bottom is tested with the txt provided...

Thank you very much for your reply, the version of the ontology I used is go_cafa3.obo. I just took DeepGOPlus's predictions.pkl on cafa and verified it without retraining the model.I...

hello simon,You can refer to https://github.com/bio-ontology-research-group/deepgoplus/blob/master/deepgoplus.py to generate predictions.pkl. line 186