Vincent Rouvreau
Vincent Rouvreau
When you download a version of GUDHI one can see that the file `CMakeGUDHIVersion.txt` is here and also the file `biblio/how_to_cite_gudhi.bib` but not the file `biblio/how_to_cite_gudhi.bib.in`. Distributing the `biblio/how_to_cite_gudhi.bib.in` besides...
In [Rips complex definition](https://gudhi.inria.fr/doc/3.4.1/group__rips__complex.html): ```txt The number of simplices in the full Rips complex is exponential in the number of vertices, it is thus usually restricted, by excluding all the...
Python third parties version detection could be enhanced in [`find_python_module`](https://github.com/GUDHI/gudhi-devel/blob/7f1b8eb706c72921141b53e607d6e2aa28e2bf19/src/cmake/modules/GUDHI_third_party_libraries.cmake#L103) using: ```python from importlib.metadata import version; print(version('hnswlib')) # 0.6.0 ``` * This would remove `find_python_module_no_version` * Requires to do `find_python_module("scikit-learn")`...
Construction from an `off_file` is deprecated from gudhi 3.5.0. When it will be removed, default value for points argument (empty list) in the constructor shall also be removed as there...
A branch that merges [zigzag branch](https://github.com/GUDHI/gudhi-devel/pull/401) with last master version
# Issue description Here is an example of the error: ```python import numpy as np from sklearn.kernel_approximation import RBFSampler from gudhi.representations import PersistenceWeightedGaussianKernel, PersistenceScaleSpaceKernel, PersistenceFisherKernel def arctan(C,p): return lambda x:...
# Context In some pages like https://gudhi.inria.fr/python/latest/wasserstein_distance_user.html#optimal-transport and thanks to `sphinx.ext.viewcode`, a `[source]` link is available to view source code for python methods, functions or classes. This kind of link...
If we go with #428 I think we could unify CubicalComplex and PeriodicCubicalComplex and the constructor could pick the correct one. The most difficult part is to detect, when constructed...
Merge reader_utils and off_reader. Fix unitary tests. API changes: * `read_persistence_intervals_in_dimension` now returns `array([], shape=(0, 2), dtype=float64)` when no persistence is found instead of `array([])` * `read_persistence_intervals_grouped_by_dimension` and `read_persistence_intervals_in_dimension` are...
With CMake >= 3.17, one can `list(APPEND CMAKE_CTEST_ARGUMENTS "--output-on-failure")` to set `--output-on-failure` default behaviour for CTest. This would help users that are facing failing tests, and even support when we...