Charlie

Hi @levlitichev, thanks for the feedback! User input on what to fix and what to add is super useful. At the moment I'm working mostly on upgrading dependencies and separating...

Assuming this is fixed, if not please open a new issue.

Hi luozhy88, I'm a little confused by the question. Are you looking for which OTUs are showing up across your samples? If so, I think that falls outside the scope...

Hi luozhy88, What were the commands you used to download and install sunbeam? From the error it looks like you might have done something other than a `git clone`. Please...

Hi @gooodle thanks for using Sunbeam! Can you check to see if there's any useful information in `path/my_project/sunbeam_output/logs/aggregate_results_OS00FF7A.log`? Also if you happen to have the full snakemake output from that...

Thanks @gooodle, it's surprising actually that it is fully empty, there should be at least a starting message in there. Is there any way you could get the output from...

Oh that is helpful, can you please also include the `sunbeam_config.yml` file for that project? It looks like maybe it's failing to access a config option from there. If you...

Yup everything looks ok there. Could you please run sunbeam again (it should just run the failing rule and fail again quickly) and then include the full output of that...

Hi @gooodle, I'm going to close this for inactivity. If you run into this or a similar issue again please open a new issue and link this one. Both sunbeam...

Hi @dtsingh, closing this for inactivity. If you have the same issue using sunbeam 4 please open a new issue.