Charlie

For me I was getting ViewPropTypes and Text.propTypes undefined errors from index.js. Fixed the first one by replacing lines 117 and 383 with ``` tagContainerStyle: PropTypes.shape({ style: PropTypes.any, }), ```...

Getting the same issue, runs fine locally but run on the cluster it can't seem to find files that do exist: ``` Missing files after 240 seconds: ['.../.snakemake/tmp.ma7p_g42', '.../file1.tsv', '.../file2.tsv',...

> Hi Charlie, I believe this problem is a bug. I solved it by updating to new version of snakemake. Version 7.8.5 works for me now. I believe the problem...

Hi @Clairmontl, I'd suggest trying to reinstall sunbeam, looks like something probably got messed up with your conda installation. Do you have anaconda/miniconda installed on your machine already? Could be...

Hi @dtsingh, That's some weird looking behavior, is miniconda already installed on your computer? What do you get if you run `command -v conda`? If this outputs 'conda' then I'm...

Closing this as it should work in sunbeam3. If you run into this problem again please open a new issue.

Thanks for that answer @carden24. @Anqi-Dai in order to only run a later part of the pipeline, there's a sort of snakemake hack you can use with the `--allowed-rules` flag....

Hi Tuhina, Sorry for the delayed reply, I just ran a test set on my machine and everything is working properly. A couple things you might check: - Are all...

Hi @quaeler & @AAMCgenomics, Unfortunately this seems to be a fairly common issue with sunbeam version

Haven't seen this issue pop up with sunbeam3 yet and megahit should resolve to a later version in the new assembly env. Marking this as closed for now, please open...