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                                            Tpan1039-ui

PdbQuantizer is too slow

Thank you for raising this important concern. We're excited to share that we've just merged a significant optimization contributed by @mdanzi. Which took a batch of 100 proteins from running...

Discrepancy in structure quantizer outputs and request for original PDB files used in the proteingym_benchmark.zip

> Thank you for your open-source work! > > Regarding the structure quantizer, I tried the example provided in the README but obtained different outputs. Below is my code and...

Structural tokenizer (`PdbQuantizer`) is too slow at processing long proteins

We're excited to share that we've just merged a significant optimization contributed by mdanzi. Which took a batch of 100 proteins from running in about 7 hours to running in...