Tim

Results 2 issues of Tim

terminate called after throwing an instance of 'std::bad_alloc'

1 comment

Hi, I got a bad_alloc error: ``` [z3101118@kc11b14 2019-05-16.TigerWTDBG2Medaka]$ module add racon/1.3.2 [z3101118@kc11b14 2019-05-16.TigerWTDBG2Medaka]$ OUT_DIR=/srv/scratch/babsgenome/BABSGenome-Jun17/assemblies/2019-05-16.TigerWTDBG2Medaka [z3101118@kc11b14 2019-05-16.TigerWTDBG2Medaka]$ READS=/srv/scratch/babsgenome/BABSGenome-Jun17/data/2019-01-22.Nanopore/Tiger/LXBAB153514.fastq [z3101118@kc11b14 2019-05-16.TigerWTDBG2Medaka]$ ASSEMBLY=/srv/scratch/babsgenome/BABSGenome-Jun17/assemblies/2019-01-24.TigerWTDBG2/tiger.wtdbg2v1.fasta [z3101118@kc11b14 2019-05-16.TigerWTDBG2Medaka]$ DATE=2019-05-22 [z3101118@kc11b14 2019-05-16.TigerWTDBG2Medaka]$ PREFIX=tiger_wtdbg2.$DATE [z3101118@kc11b14 2019-05-16.TigerWTDBG2Medaka]$ SAM=/srv/scratch/babsgenome/BABSGenome-Jun17/assemblies/2019-01-24.TigerWTDBG2/tiger.wtdbg2v1.sam...

Buttery-eel using a different guppy config file than requested

The issue presented as Buttery-eel saying it is doing sup basecalling when it was supposed to be doing hac basecalling for me: ``` timamo@brenner-fpga:PSXPX230069:$ qstat -j 4204295 | grep -e...