Tien Phan

Results 7 comments of Tien Phan

I used AF-2.3.0. When loading the result*.pkl file, it complained: ``` line 48, in __init__ self.data.append(pkl.load(openfile)) ModuleNotFoundError: No module named 'jax' ``` Do you (@pur80a) know to to fix it?

I follow the one you ended up with above. When running ```python run_AlphaPickle.py -od out_alphafold/HSPB1 ``` Tried `pip3 install jax`, I got ``` ModuleNotFoundError: jax requires jaxlib to be installed....

FYI. Other people also got this error. https://stackoverflow.com/questions/76548069/pickle-load-gives-jax-related-error-no-matter-what

Update: I installed older versions of `jax` and `jaxlib` as follows `pip install jax==0.3.25 jaxlib==0.3.25` and it worked on CPU, as shown in the warning. ``` WARNING:jax._src.lib.xla_bridge:No GPU/TPU found, falling...

Hi @Aroids, I used AF-2.3.0 and got a similar error above. l installed jax using `pip install --upgrade "jax[cpu]"` (`jax=0.4.13, jaxlib = 0.4.13` were installed), but I still got the...

Update: I installed older versions of `jax` and `jaxlib` as follows `pip install jax==0.3.25 jaxlib==0.3.25` and it worked on the CPU, as shown in the warning. ``` WARNING:jax._src.lib.xla_bridge:No GPU/TPU found,...

Hi Raimondas, Do you have a worked example for how to use the openmm-plumed plugin? I searched for it but didn't see any. The instructions in the readme file are...