Matthys Potgieter

We use this function to generate heatmaps as part of a REST API in a production setup - latency increases until requests time-out. Really want to stick to the library,...

On further thought, this may be due to differences in the default advanced settings, but I could not find any yet on cursory inspection, and the difference in results using...

Hi Harald, Thanks for the quick response! I have tested it with the IdentificationParametersCLI using the new versions (only commandline options but without using the template .par as before) and...

Just to clarify, the CLI analysis (SearchGUI and PeptideShaker) was run on HPC linux cluster with different version of java, so the small difference is probably not relevant at all....

Thank you Harald, Please let me know if I can help testing at any point, Kind regards Thys

R has a nice mzid parser library (MSnID) that should be easy to wrap in a python function using rpy2...if I have some time ill see if I can get...

@bgruening Thanks! I will check it out! You just saved me from some work it looks like :)