Théo Estienne

Hello, Thanks for your interest to my code. To launch it, you need to be in the parent folder and launch with `python -m` For instance : ``` cd /home/home_folder/...

Hello, The data is not provided in the GitHub. You need to download both BraTS 2018 and OASIS3 before running the code. You can find the datasets on the following...

During my work, I save all the BraTS dataset into a numpy array. There is no preprocessing, I just load the nii.gz files and save them as .npy. You have...

What did you do ? I don't understand, how the problem occurs

Normaly, if you do the training with brats file, you should open image with the following line : https://github.com/TheoEst/joint_registration_tumor_segmentation/blob/62b4b25f3c3285a016861e74f3708aca5511f796/Dataset.py#L307 And the function `np.load` can load `.npy` files without problem.

You need to put in a py file and run it independently.

Hello, Indeed there is a problem in the code. I will correct it soon best regards

Fix in 2cefdeb1e00c8516bb1382697dd11ccb73cdbdb1

Hello, Thanks for your question. To run the code, you have to be in the parent folder of abdominal registration, and use the command "python -m abdominal_registration.main ....."

I didn't update the models on GitHub as they are too big (~350MB each), and they don't fit in GitHub I create a link for you where you can find...