Thao Phuong Cao

FileNotFound Error while training a new model

3

Hi all, I am wondering if anyone has encountered this error: FileNotFoundError: The directory '/home/kcutler/DataDrive/debug' does not exist. I am trying to train a new omnipose model (linux terminal -...

Hi there! I was trying to open a histology WSI in .tif and bumped into the following error: File ~/.local/lib/python3.11/site-packages/histoprep/_backend.py:235 in __init__ self.__reader = openslide.OpenSlide(path) AttributeError: module 'openslide' has no...

Train an Omnipose model with 3-channel input images

1

Hi all, I am trying to train a model from scratch with: - Input images: (160,160,3) RGB images (array of uint8) - Input masks: (160,160) 16-bit images - Training via...