TTT16

Hi, Has this issue got fixed? I ran into the same problem. Please help to provide the solution. Thank you!

Hi Jame, My own data was from GridIOn, Nanopore Directed RNA seq. The output files were fast5 and fastq. The fast5 files are multi-read files. We tried the SquigglePlot directly...

Hi James, I tried to unzip the tsv file, and do it again, but it still gave me error. How can I fix it? THank you! [tmhtxt53@cn001 ~]$ python /cm/shared/apps/squigglekit/1.5.1a/SquigglePlot.py...

Hi, sorry for my mistake. I did again like you suggested, and it gave me warning/error like below: [tmhtxt53@cn001 ~]$ python /cm/shared/apps/squigglekit/1.5.1a/SquigglePlot.py -s /condo/kisslab/tmhtxt53/GridIon/m6Apaper_data/SquiggleKit/SRR8767348_squiggle-pull.tsv --raw_signal --save SRR8767348_squigglePlot.png --save_path /condo/kisslab/tmhtxt53/GridIon/m6Apaper_data/SquiggleKit Cannot...

And, one of png file like this: How do I know where is A, U, C, G or modified nucleotides? Thank you