dyMEAN

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How to deal with the problem when starting data preprocess?

3

(dyMEAN) dell@dell-Precision-7920-Tower:/mnt/e/code/dyMEAN$ bash scripts/data_preprocess.sh all_structures/imgt all_data Locate the project folder at /mnt/e/code/dyMEAN Processing SAbDab with output directory /mnt/e/code/dyMEAN/all_data Processing RAbD with output directory /mnt/e/code/dyMEAN/all_data/RAbD 2023-06-15 15:59:18::INFO::Namespace(fout='/mnt/e/code/dyMEAN/all_data/rabd_all.json', n_cpu=4, numbering='imgt', pdb_dir='/mnt/e/code/dyMEAN/all_structures/imgt', pre_numbered=True,...

liusfore

model.pt lost when running Affinity Optimization test script

1

The code of [dyMEAN](https://github.com/THUNLP-MT/dyMEAN/tree/main)/[evaluation](https://github.com/THUNLP-MT/dyMEAN/tree/main/evaluation) /pred_ddg.py load a model in evaluation/ddg/data folder which is not exist.

semal

Downloads for sabdab broken

1

Hi, It seems that the sabdab database is broken and returns a 500 server error. https://opig.stats.ox.ac.uk/webapps/newsabdab/sabdab/archive/all/ Do you guys happen to have downloaded version somewhere you can share? Thanks!

ackbar03

The complex and Hard pipline

5

Dear researcher thanks for sharing this pipline, but you try to design Antibody with a lot of package, but I believe it can be easier than you made it pipeline,...

Cosmos9526