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feat: get and apply complex data from complex portal

Open ae-tafur opened this issue 3 years ago • 0 comments
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Main improvements in this PR:

Solution to #160

Add two functions:

  1. getComplexData.m to get curated information for complex in complex portal, and save it in a .json file.
  2. applyComplexData.m which read the .json file with the complex data and apply it to populate the model.ec.rxnEnzMat field in the model. For now, I suggest to run applyComplexData after makeEcModel since it returns the proposed complex information for manual curation as suggested here

I hereby confirm that I have:

  • [x] Tested my code with all requirements for running GECKO
  • [ ] Selected devel3 as a target branch (top left drop-down menu)

ae-tafur avatar Oct 21 '22 00:10 ae-tafur