Surbhigrewal

Hi, Im running scaffold with ragtag but I am getting the following error Traceback (most recent call last): File "/gpfs01/home/sbzsm11/miniconda3/envs/ragtag/bin/ragtag_scaffold.py", line 577, in main() File "/gpfs01/home/sbzsm11/miniconda3/envs/ragtag/bin/ragtag_scaffold.py", line 420, in main...

Index error during align_reads in denovo mode

2

Hi there, I'm getting the below error after the call_mods has generated the bam file and I use it to align to ref. It generated the `pbmm2.bam` file but could...