elastix
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SuperElastix
Official elastix repository
I was using elastix 4.9 static library version. I created two threads to run registrations simultaneously, one with 3d registration and the other with 2d registration. And the result was...
Hi, I was trying to run Elastix more than once in sequence with two different fixed and moving images. The result of first run is fine but for second run...
When `itk::TransformixFilter` is templated with a `TMovingImage` that does not match the internal `ElastixTemplate` `TMovingImage`, this `dynamic_cast` will fail: https://github.com/SuperElastix/elastix/blob/a187f9af5d11abff558faad1aaa4605e8c15bcce/Core/Kernel/elxElastixTemplate.hxx#L100-L101 and no moving image will be detected here: https://github.com/SuperElastix/elastix/blob/a187f9af5d11abff558faad1aaa4605e8c15bcce/Core/Kernel/elxElastixTemplate.hxx#L387-L388 and...
Hi everyone, I just tried out the new elastix 5.0 version vs the previously installed elastix 4.9 version on the same data with the same parameter file performing a bspline...
I recently successfully compiled Elastix 5.0.0 with GPU support, but it doesn't appear to speed up anything relative to the CPU version. I can use the `(Resampler "OpenCLResampler")` option but...
Tests elastix_run_3DCT_lung.NMI.bspline.ASGD.001_COMPARE_TP fails on MacOS: > 51: Computed difference: 21.7354 / 595.533 = 0.0364974 https://dev.azure.com/kaspermarstal/Elastix/_build/results?buildId=1227&view=logs&j=d9d370b1-18a3-5231-ee95-54c0a379145c&t=4d0a7acf-cb41-587f-f906-927f05b3e2be&l=27022 Viktor (@ViktorvdValk) was able to locally reproduce this issue (superelastix.slack.com Direct Messages, October 26, 2020)....
Hi, I was trying to convert a euler 3D transform parameter file to a transform matrix to manually compute deformation field, by SimpleITK Euler3DTransform. I also used elastix command line...
Hi, I am registering a mouse brain to a template, on Windows, using the following command: _elastix -f template.tiff -m ds_sample_200320_142837_25_25_ch01.tif -out ./reg/vanilla -p 01_ARA_affine.txt -p 02_ARA_bspline.txt_ When CheckNumberOfSamples is...
Marius (@mstaring) proposed that we should reduce the behavior differences between the elastix library and the elastix executable. The elastix source tree currently checks "if it is the elastix library"...
Suggested by the comments here: https://github.com/SuperElastix/elastix/blob/75f52c644a1b84b3ba266aa11e161512c50291a9/Core/Main/itkTransformixFilter.hxx#L117-L124 Disk IO is currently required for computing the spatial jacobian, determinant of the spatial jacobian, deformation field, fixed point set transformations. It would be...