elastix

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2d-3d registiration Parameter settings?

3

http://elastix.bigr.nl/wiki/index.php/Par0013 (Interpolator0PreParameters -0.009475 -0.006807 -0.030067 0.0 0.0 0.0) (ResampleInterpolator0PreParameters -0.009475 -0.006807 -0.030067 0.0 0.0 0.0) (Interpolator0FocalPoint 0.54 -0.85 -813.234) (ResampleInterpolator0FocalPoint 0.54 -0.85 -813.234) How are the above parameters set? Where...

GreateLi

Hello, I am rookie to image field. I am trying to preform atlas registration in a Fiji Plugin, but it seems doesn't work out, I am wondering if I installed...

jeng87

Missing CMake package config files after installing

2

This issue re-raises the already closed [issue ](https://github.com/SuperElastix/elastix/issues/78). After installing Elastix as a library, the .cmake config files are missing: ``` ElastixConfig.cmake ElastixConfigVersion.cmake ElastixTargets.cmake ``` Current source CMake file correctly...

poretga99

Installing new components with SimpleITK Elastix #457

1

Hi, Ive done the SuperBuild for SimpleITK - Elastix and want to play around with different parameters. For example, I want to use the FullSampler as ImageSampler. However, when running...

zwep

Convert elastix RecursiveBSplineTransform to ITK BSplineTransform during I/O

2

Check that elastix RecursiveBSplineTransform data can be converted losslessly to ITK's BSplineTransform format, and then do so, when elastix parameter `ITKTransformOutputFileNameExtension` is non-empty. Consider unifying RecursiveBSplineTransform and BSplineTransform for I/O...

N-Dekker

ENH: Add TransformedPointLimitedEulerSameAsUnlimitedEuler3D unit test

1

Tests that the new limited Euler transform by Žiga Špiclin (@zigaso) yields the same point-to-point transformation as the unlimited Euler transform, when there is no limit specified.

N-Dekker

Euler transform with optional upper/lower limits to each parameter

5

Intro --- This adds a new transform dubbed the `AdvancedLimitedEulerTransform`, which implements per axis upper and/or lower limiting. It achieves this functionality by clamping the transform gradient based on the...

zigaso

Hi, This question may be not directly related to the library. I am just wondering how you generated the moving image in Fgiure 2.5 of the manual. I try to...

yzh211

Difference between ITK and elastix BSplineTransform dealing with input points at the border

10

It appears that the elastix version of BSplineTransform excludes points at the border of the TransformDomainPhysicalDimensions, while ITK does include them, with the transformation. For example when the OptimizerParameters are...

N-Dekker

Non-standard build

3

Hi, I built version 5.0.1 from source, and it produced a bunch of static libraries, but no executable. How do we get the executables to build ? I could not...

mboisson