Grammatikati Konstantin
Grammatikati Konstantin
Hello. When I ran `mosdepth` on our bam file I've got error which origin is from `hts-nim` - that's why I've created issue here. Here is my error: ``` root@b79bb970b062:/outputs#...
Hello, it's not really a bug, but a feature request. We experienced this problem due to high amount of pools from docker hub in our IT department: ``` Error response...
According to documentation: https://www.rdocumentation.org/packages/xlsx/versions/0.6.5/topics/read.xlsx  Here is my simple test `xlsx` file:  - Without `colClasses`: ```r > META str(META) 'data.frame': 1 obs. of 3 variables: $ A: chr "ABC"...
Hello, current releases of both https://github.com/griffithlab/pVACtools and https://github.com/openvax/mhcflurry doesn't support tensorflow 2.0.0+ and have limitation for tensorflow version: `tensorflow>=1.15.0,
**Describe the bug** We tried to upgrade `zig` after 0.11.0 [release](https://ziglang.org/download/0.11.0/release-notes.html), but build failed. **To Reproduce** Install `zig v0.11.0` and try to build from source. **Expected behavior** All building well...
Hello, as you can see in pVACtools issue https://github.com/griffithlab/pVACtools/issues/1084 - https://github.com/openvax/mhcflurry and mhcnuggets doesn't work with latest [2.16.1 version of tensorflow](https://github.com/tensorflow/tensorflow/releases/tag/v2.16.1). ``` Exception: An error occurred while calling MHCnuggets: /usr/local/lib/python3.10/dist-packages/keras/src/layers/core/masking.py:47:...
Hello. In issue #65 @jjzieve said that `GTCtoVCF` should work on python3, but last commit on master says: > GTCtoVCF is currently only known to work with python2.7 I can...
Hello, thanks for great tool. Can we get `lumpy-sv.tar.gz` like for all previous releases?
### System details Browser Version: Latest Opera and Chrome Output of `sessionInfo()`: ``` > sessionInfo() R version 4.3.3 (2024-02-29) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 22.04.4 LTS Matrix products: default...
According to [docs](https://docs.docker.com/reference/build-checks/undefined-var/): > Before you reference an environment variable or a build argument in a `RUN` instruction, you should ensure that the variable is declared in the Dockerfile, using...