StevenJRobbins

Thank you, Anton. I appreciate this little hack. Just to be clear though, if I run metaspades this way, will the metaspades assembly pipeline finish correctly? For example, I suspect...

Thanks again, Anton. For anyone reading in the future, I successfully got metaspades to run on the new server by running a find replace on all files in all subdirectories...

Thanks Anton. It worked in my test and successfully output the necessary files so looks like a hack solution, at least in my case.

Hello! I just wanted to follow up on this. I’m seeing a lot of buzz about improvement in ONT T2T assemblies using the new —ont flag. This response was helpful....

Thanks! Interesting that you phrase this. Are you saying that meta-hifiasm would not perform well on ONT data without this --ont workaround you describe here? It's interesting because recent benchmarks...

Thanks for taking the time for the detailed reply. This is really interesting and helpful. > [@StevenJRobbins](https://github.com/StevenJRobbins) thanks for your interest! > > > We've actually been encouraged by ONT...

Hi Heng (or Dr. Li, whichever you prefer :-) ), Thank you for your response. Speak of the devil, when I mentioned this data I didn't realize the preprint would...