Stephan Preibisch

Hi, no, please revert this for now ... I have to talk with Fernando first

ojAlgo seems to do well according to the tests, and at the same time has the smallest memory footprint: http://lessthanoptimal.github.io/Java-Matrix-Benchmark/memory/2013_10/ Both are interface-based so it should actually be possible to...

I have started to write a simple infrastructure for calling native and CUDA code here: https://github.com/fiji/SPIM_Registration/tree/master/src/main/java/spim/process/cuda Two examples of CUDA implementation for separable and non-separable convolution are here, both are...

It is a little bit unforeseeable how much RAM the FFT will actually take (CUDA FFT documentation). Ideally use power-of-two values or at least sums of powers-of-two to avoid these...

Try 512 instead, I am sure it will just work. My 4GB card crashed on 357x415x214 (or so) but computed 1024x1024x512. It is somehow related to the way it is...