Solenyalyl

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Manta cannot detect same chromosome large deletions

I also got this problem,any suggestions?

Manta cannot detect same chromosome large deletions

I found my solution,I have set target bed file,when drop this parameter,we got the large deletions and translocations ---- Replied Message ---- | From | ***@***.***> | | Date |...

start, end and length not adding up

I have also met the same question, but it cannot be solved by installing a newer version of annotSV,because I have installed the newest version,v3.1.2,and when I run the example,it...

Advice on quality of output(not an issue)

@ziko2222 ,have you solved it, I have received the same problem

No preliminary seqid/taxid mapping files found, aborting.

I'm stucked too. anyone can help?