ZhiSong

TypeError: argument should be a bytes-like object or ASCII string, not 'NoneType'

1

hello, I would like to know what's wrong with that, thanks!

导师，shape预测结果没有生成框，训练过程没有问题，用了预训练试了也没问题，会是哪里的问题

5

导师，请问没有识别并且分割到会是哪里的问题，每次输出的都是原图，训练过程也没有问题，我用shape的预训练模型和我自己训练的都试了都检测不出，插装发现box_thre是none，直接给返回来了

Hello there, I have a problem using Quast. "ERROR! Compilation of contig aligner software was unsuccessful! QUAST functionality will be limited. Failed aligning the contigs for all the assemblies. Only...

How to use spades operate a fasta file, especially simulated reads in fasta format from badread?

8

### Description of bug (bio) zhisong@zhisongs-MacBook-Air spades % bin/spades.py -s ../accuvirnew/bad_nano/hiv_50_2k.fastq -o testfasta --isolate == Error == /Users/zhisong/Desktop/accuvirnew/bad_nano/hiv_50_2k.fastq is not a valid FASTQ file Traceback (most recent call last): File...

After I run nextPolish run.cfg, the NextPolish vanished and generate a copy

2

Hi, I tried to polish a virus genome(hiv) with a single end long read file and a genome, the NextPolish folder only have one single file called 00.score_chain and It...