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                                            Sithara Vivek

SVTyper fails to genotype with hg38 alignments. --split_bam (-S) is deprecated

Hi, We are trying to use Speedseq SV call for our whole genome analysis pipeline. We processed the HapMap sample NA12877. I am getting the same warning when I run...

Segmentation fault error in a subset of samples using LUMPY Express

HI, I am getting similar error. What's the solution for this? I can not share data as these are real patient samples. I will greatly appreciate your help. Thanks in...