VANITHA SHYAMILI KUMAR

This is my command: snippy --outdir snps_output_rep4 --ref GCA_018093105.1_ASM1809310v1_genomic.fna --ctgs S.aureus_bat3_r3..contigs.fasta I am getting error while running samtools markdup I am using contigs and ref genome in fasta format. PLease...

Trying to annotate using colorstrips: Error in COLOURS[[n]] : subscript out of bounds

2

I am trying to annotate my tree using colorstrip. There are 47 different strains in my tree. So, I need to give 47 colors to my tree based on the...