ShirelyI

你好，我的agp文件ID是最终组装的scaffold水平的ID，bam文件是比对到contig水平的基因组，图画出来也是空文件，请问这种情况能用这个脚本吗？

Hi，I also have the same issue, but not solved yet, how did you solve this problem? Thanks!

Hi mlathara, it doesn't work at all chromosomes but chr01, the contig description from the fasta is as follows and I only analyse the Chr***