Sheerlik

Thank you Jeremy for you response! We did that- krakenuniq-1.0.4_2 ./krakenuniq-build --db ./DBDIRmicrobial-nt/ --kmer-len 31 --threads 50 --taxids-for-genomes --taxids-for-sequences --jellyfish-bin and now received a different error- Kraken build set to...

Thank you Jeremy for your prompt answer! You are right, our jellyfish version was version 2 (although jellysfish was not installed separately from krakenuniq). We installed jellyfish-1.1.12. ran the command:...

Thank you Jeremy! We changed the hash size and it looks like its working. I will let you know if we encounter additional build problems.

Thank you for your quick response Steven! Our machine uses 190 GBRAM, we use Amazon EC2 c5d.24xlarge We are using the indexed DB that you have published. We tried a...