Sturla Magnus Grøndal

I think the error might be caused by the default value of cluster_values parameter in testCV. If cluster_values is set to a cluster that doesn't exist (for example through using...

@chenxofhit I have large CyTOF datasets that I cluster. I have tried several other methods, such as k-means, phenograph, x-shift, leiden, FlowSOM, but they all have drawbacks (mainly being very...

@mleipold Feel free to try out my fork at https://github.com/sansmorel/premessa There is one known bug where plots/channels accumulate if you first plot one type of beads then change bead type...

Hi, @mleipold Regarding concatenation before normalization or vice versa I don't think this makes any difference. As I understand it the baseline used for normalization is calculated using all files...