Seg3D
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Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.
Propagate CMAKE_OSX_ARCHITECTURES, CMAKE_OSX_DEPLOYMENT_TARGET and CMAKE_OSX_SYSROOT to External projects. Seg3D is already done. For the configure and bjam builds, make sure **-isysroot** /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/..., **-Wl,-syslibroot**,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/... and **-mmacosx-version-min**=10.X are configured correctly.
Some users want to be able to build with other installations of python than what is distributed with Seg3D. This is not currently possible. 1. Being able to point to...
Add a tool to create a new volume filled with a given default value (give user a choice of type and type min, max and 0). Use case would be...
I tried to load in a 2.4 GB file with Seg3D v2.4.0_rc2 d2b5fd48b2 (on MacOS Sierra) but it fills up the entire RAM memory (64 GB). Ayla has the file...
Nrrd files with vector data are being imported incorrectly. The first size (number of vector components) is being taken as the X axis. The kinds header entry should be read...
StateBase thread consistency check relies on assert, which can lead to segfaults in release builds. See the ASSERT_IS_APPLICATION_THREAD_OR_INITIALIZING macro.
Add support (and documentation) for reading a Seg3D specific PYTHONPATH environment variable, something like SEG3D_PYTHONPATH, so it won't interfere with the general PYTHONPATH for system python installations. It should be...
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Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.