Seg3D icon indicating copy to clipboard operation
Seg3D copied to clipboard

Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.

Results 101 Seg3D issues
Sort by recently updated
recently updated
newest added

Shapeworks is working on an integration that calls Seg3D for manual editing. The old shapeworks client had something similar. https://github.com/SCIInstitute/ShapeWorks/issues/1940 - [ ] data exchange for ShapeWorks - [ ]...

A self contained zip file like ShapeWorks uses?

in preparations for VTK Integration and other upgrades

build
external dependency
core
software processes
Refactoring

Implement VTK viewer parallel to OpenGL viewer

renderer
volume rendering
software processes
Refactoring

export segmentation through the UI allows users to set the index value for each mask layer, but this is not exposed for the python/action layer.

Seen on Windows. Dicom exporter does not generate proper data for mask or data layers.

bug
data

### Description When reading these dicom files, seg3d does not assign the correct slice thickness and it reverts to 1. Also, the slice direction is not correctly interpreted by one...

### Description The application fails to start on Windows 10 x64 ### Steps to Reproduce 1. Install latest version on a clean Windows 10 64-bit (10.0.18362 Build 18362) without installed...

### Description Seg3D 2.5.0 fails to start under Windows 10 ### Steps to Reproduce 1. Download Seg3D2-2.5.0-win64.exe to Windows 10 2. Run installer, apparently successfully 3. Run Seg3D2 using its...

bug
high priority

For some tools, especially the one proposed in issue #45, it would be useful to save and load point clouds as seed point sets.

feature request
tool