Rui-Jing

Some columns of the MAF file are empty

1

Hi， Thanks for developing this user-friendly tool for vcf2maf. When i finished running vcf2maf.pl, the output maf file was not complete. My code is : **perl vcf2maf.pl --input-vcf WES/QC/12.mutect2/Tumor_pass.vcf --output-maf...

Output bam files become smaller after shiftGAlignmentsList

4

Hi, Thanks for developing this user-friendly tool for ATAC-seq. I found some problems after running shiftGAlignmentsList, and the output BAM file is about half the size of the input file....

library（esATAC）error

1

Hi， Thanks for developing this user-friendly tool. I have a problem when I run library (esATAC). The error is: **Error: package or namespace load failed for ‘esATAC’: .onLoad failed in...

Discrepancies Between matched Single-cell and Bulk Transcriptome Samples

1

Hi Tinyi, Firstly, I would like to express my appreciation for developing BayesPrism, a user-friendly software that has significantly aided my research. However, I have encountered some issues during its...