RolandFaure

I have the same issue, have you had any insight at what caused it and how to solve it ? Thanks !

Hi again, I still don't know what caused the issue, but I designed a workaround if anyone is interested: [github.com/RolandFaure/reconstitute_miniasm_contigs](url) It is a simple python script that reconstitutes the sequence...

Hi, Sorry for the late reply. If there are no BX:Z: tags in the sam file, GraphUnzip will not be able to retrieve barcode information and that is probably the...

Hi Yu-kyung, I'd love to take a look at your data. The email being sent via github, I could not see the attached files. Could you send them directly to...

For the weird lines, I realized with your message that this is normal behavior. GraphUnzip uses pickle.dump to dump the files, thus they are not directly readable. This should not...

Hi @ykkim0127, I've looked attentively at your results. GraphUnzip worked fine. Here is an explanation of your results: - number of contigs increased: GraphUnzip is designed to retrieve all haplotypes...

Hello, We'd like to force long alignments on our graph. That is because we're working on a genome full of repeats and we want to force the long reads to...

@bioconda/core Hello, This version of HairSplitter does not pass some tests anymore - on linux if I understand well. The only thing that changed since last pull request is the...