Roden Luo

Jackhmmer failed without error message

3

Hi, I have one run that failed at the Jackhmmer step while the other run passed it. The one failed did not give any error message. But I guess it...

How can I debug Molecular Nodes? (Cannot load some PDBs and mmCIFs)

3

Hi Brady, I have a local PDB file, attached as [CTD.zip](https://github.com/BradyAJohnston/MolecularNodes/files/8644818/CTD.zip). It is self-generated so that it has nothing else but only the atom position information. It can be opened...

Small bug at the right side nav bar, not sync

2

If one clicks "begin" in the following screenshot, the side nav bar is highlighted as expected. If one clicks "end" in the following screenshot, the side nav bar is not...

why is `run_figure.py` down now?

2

Hello, Thank you very much for this effort. I just wonder why is the following script now missing in your current `master` branch. https://github.com/Zuricho/ParallelFold/blob/0b2b66b0d11fd717eb10809cba2424822a46374f/run_figure.py

`External forces` inconsistent with `Create from base pairs`

3

Hi, I used [`tacoxDNA/src/cadnano_oxDNA.py`](https://github.com/lorenzo-rovigatti/tacoxDNA/blob/master/src/cadnano_oxDNA.py) [`7_icosahedron.json`](https://github.com/sulcgroup/oxdna-viewer/blob/master/examples/icosahedron/7_icosahedron.json) ` he -o` to generate a `7_icosahedron.json.oxview` file (attached below). Drag and drop it into oxview, and then `Dynamics -> Forces -> Create from base...

How to integrate to openFrameworks?

1

Hi, I would like to use ImGuizmo in [openFrameworks](https://openframeworks.cc/). There is an [ofxImGui](https://github.com/jvcleave/ofxImGui) repo that integrated ImGui into openFrameworks. I do not see any tutorial on how to do it...

尝试了几个不同的方案。其中第三个尝试，不新建 cpp 文件的话，没有做出来，不确定有没有方案。详细描述在 README.MD。代码在不同的分支里。

即将重启翻译，欢迎提供反馈

5

应几个朋友的邀请，即将重启翻译，并考虑在B站上连载一门公开课，欢迎大家提供反馈

Ch02 typo & improvements

2

``` These values belong to different *types*: `2` is an integer, and "Hello, World!" is a *string* === *integer* ```