Ren-Meng

Bowtie2 (2.5.1) reported very different alignment rates with and without --no-mixed --no-discordant

3

Bowtie2 (2.5.1) reported very different alignment rates with and without --no-mixed --no-discordant ### without --no-mixed --no-discordant bowtie2 -p 20 -x ~/hg38.bowtie2.index -1 R1.fastq.gz -2 R2.fastq.gz --local --very-sensitive-local -S rep1.sam 39246458...