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                                            Matt Regner

how to use original Dimension Reduction information from Seurat.

@aina91 you change the dimension reduction slot as well as the clustering slot to store the original information from Seurat (writing to loom files seems to work well): ```` from...

How to assign optimal k value to a new variable?

Yes, DiagMultiKPlot() prints the optimal k values to the console. However, I am trying to implement MultiK in a pipeline context (non-interactively on a remote compute cluster). I will be...

How to assign optimal k value to a new variable?

Hi @siyao-liu I figured out how to store the optimal k as a new variable! I reconstruct the `tog` object for input into `findOptK()` using the following: ``` tog 1])...

How to assign optimal k value to a new variable?

No rush at all! The code above should suffice for my specific case. I appreciate your help. Thanks!