RJBeng

Hello, I am running Atom version 1.53.0 on macOS. When making the Snakefile, the syntax are highlighted but they are not indented. I have tried to name the file Snakefile...

kraken2 download library fail

22

Hello, I am using Kraken2 v2.1.2. When trying to download library `./kraken2-build --download-library viral --db viral_db` I get the following error. > rsync: link_stat "/all/GCF/002/957/295/GCF_002957295.1_ASM295729v1/GCF_002957295.1_ASM295729v1_genomic.fna.gz" (in genomes) failed: No such...

Hi, This is in relation to #102 `kraken --threads 8 --preload --db database --fastq-input --gzip-compressed --paired s1_for.fq.gz s1_rev.fq.gz --out-fmt paired --fastq-output --unclassified-out s1_uc --output unclassified.txt` Using the bug fixed classify.cpp...